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Attribute
Research Tooling & Frameworks

PyMOL Molecular Graphics System

Schrödinger
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CategoryResearch Tooling & Frameworks
CompanySchrödinger
PriceCommercial license / Free open-source build
StatusStatus not confirmed
AvailabilityAvailable for Windows, macOS, and Linux
Last checked20/09/2026
FeaturesHigh-resolution ray-tracing for publication-ready molecular structures and figures, Comprehensive measurement tools (distances, hydrogen bonds, angles, surface area), Extensible Python scripting API for automated structural rendering and analysis, Integration with electron density maps and crystallographic symmetry tools
Entry typeSoftware Tool
Access modeCommercial & Open Source Build
AI roleStructural Visualization
Input dataNot recorded
Output dataNot recorded
Licence conditionsSchrödinger Commercial License / Open-Source PyMOL (Python-based)
Commercial eligibilityCommercial licenses available with incentive support; open-source build available
Compute requirementsStandard desktop or laptop with OpenGL support
ValidationNot recorded
Type3D Molecular visualization software
Intended useNot recorded
CompatibilityNot recorded
ManufacturerSchrödinger, Inc.
Biological applicationStructural biology, drug-target complex visualization, and protein-protein interface analysis
Research workflowLoad PDB/mmCIF -> style secondary structures and binding pockets -> export high-res figures
Evidence levelFeatured in tens of thousands of structural biology papers across Nature, Science, and PDB
Integration evidencehttps://pymol.org
Laboratory handoffVisualizes mutations for site-directed mutagenesis experiments